Why Does My SciKit Linear Regression Has Lower R-squared When I Add One More Independent Variable?
Introduction
Linear regression is a fundamental technique in machine learning used for predicting continuous outcomes based on one or more predictor variables. It is widely used in various fields, including economics, finance, and social sciences. In this article, we will discuss a common issue encountered when using linear regression in SciKit Learn, a popular Python library for machine learning. Specifically, we will explore why adding one more independent variable to the model can result in a lower R-squared value.
Understanding R-squared
R-squared, also known as the coefficient of determination, is a statistical measure that indicates the proportion of the variance in the dependent variable that is predictable from the independent variable(s). It is a widely used metric to evaluate the goodness of fit of a linear regression model. A higher R-squared value indicates a better fit of the model to the data.
The Problem
You are trying an example code of linear regression from the web, and the original test data has a score of 0.94. However, when you add one more additional X, which is similar to the original one, the score becomes 0. This is a common issue encountered when using linear regression in SciKit Learn. In this section, we will discuss the possible reasons behind this phenomenon.
Overfitting
One possible reason for the lower R-squared value is overfitting. Overfitting occurs when a model is too complex and fits the training data too closely, resulting in poor performance on new, unseen data. When you add one more independent variable to the model, it may become too complex and start to fit the noise in the data, rather than the underlying pattern. This can lead to a lower R-squared value.
Multicollinearity
Another possible reason for the lower R-squared value is multicollinearity. Multicollinearity occurs when two or more independent variables are highly correlated with each other. When you add one more independent variable to the model, it may be highly correlated with the existing variables, resulting in a lower R-squared value.
Data Quality Issues
Data quality issues can also contribute to a lower R-squared value. If the data is noisy or contains outliers, it can affect the performance of the model. When you add one more independent variable to the model, it may exacerbate the data quality issues, resulting in a lower R-squared value.
Model Complexity
Finally, the complexity of the model can also contribute to a lower R-squared value. When you add one more independent variable to the model, it may increase the complexity of the model, resulting in a lower R-squared value.
Example Code
To illustrate the issue, let's consider an example code using SciKit Learn. We will create a simple linear regression model with two independent variables and evaluate its performance using R-squared.
import numpy as np
from sklearn.linear_model import LinearRegression
from sklearn.model_selection import train_test_split
from sklearn.metrics import r2_score

np.random.seed(0)
X = np.random.rand(100, 2)
y = np.random.rand(100)
X_train, X_test, y_train, y_test = train_test_split(X, y, test_size=0.2, random_state=0)
model = LinearRegression()
model.fit(X_train, y_train)
y_pred = model.predict(X_test)
r2 = r2_score(y_test, y_pred)
print("R-squared:", r2)
Adding One More Independent Variable
Now, let's add one more independent variable to the model and evaluate its performance using R-squared.
# Add one more independent variable to the model
X_train_new = np.hstack((X_train, np.random.rand(80, 1)))
X_test_new = np.hstack((X_test, np.random.rand(20, 1)))
model.fit(X_train_new, y_train)
y_pred_new = model.predict(X_test_new)
r2_new = r2_score(y_test, y_pred_new)
print("R-squared (new):", r2_new)
Conclusion
Q: What is the main reason behind the lower R-squared value when I add one more independent variable to the model?
A: The main reason behind the lower R-squared value is overfitting. When you add one more independent variable to the model, it may become too complex and start to fit the noise in the data, rather than the underlying pattern. This can lead to a lower R-squared value.
Q: How can I prevent overfitting in my linear regression model?
A: There are several ways to prevent overfitting in your linear regression model. One way is to use regularization techniques, such as L1 or L2 regularization, to reduce the complexity of the model. Another way is to use cross-validation to evaluate the model's performance on unseen data.
Q: What is multicollinearity, and how can it affect my linear regression model?
A: Multicollinearity occurs when two or more independent variables are highly correlated with each other. When you add one more independent variable to the model, it may be highly correlated with the existing variables, resulting in a lower R-squared value. To avoid multicollinearity, you can use techniques such as feature selection or dimensionality reduction.
Q: How can I check for multicollinearity in my data?
A: You can check for multicollinearity in your data by calculating the variance inflation factor (VIF) for each independent variable. A high VIF value indicates that the variable is highly correlated with other variables.
Q: What is the difference between R-squared and adjusted R-squared?
A: R-squared is a measure of the goodness of fit of a linear regression model, while adjusted R-squared is a measure of the goodness of fit that takes into account the number of independent variables in the model. Adjusted R-squared is a more robust measure of the model's performance.
Q: How can I improve the performance of my linear regression model?
A: There are several ways to improve the performance of your linear regression model. One way is to use feature engineering techniques to create new features that are more relevant to the problem. Another way is to use ensemble methods, such as bagging or boosting, to combine the predictions of multiple models.
Q: What is the role of data quality in linear regression?
A: Data quality is crucial in linear regression. If the data is noisy or contains outliers, it can affect the performance of the model. To improve the performance of your linear regression model, you should ensure that the data is clean and accurate.
Q: How can I handle missing values in my data?
A: There are several ways to handle missing values in your data. One way is to use imputation techniques, such as mean or median imputation, to replace the missing values with a suitable value. Another way is to use machine learning algorithms that can handle missing values, such as decision trees or random forests.
Q: What the difference between linear regression and logistic regression?
A: Linear regression is used for predicting continuous outcomes, while logistic regression is used for predicting binary outcomes. Logistic regression is a type of linear regression that uses a logistic function to model the probability of the outcome.
Q: How can I choose between linear regression and logistic regression?
A: You can choose between linear regression and logistic regression based on the type of outcome you are trying to predict. If the outcome is continuous, you should use linear regression. If the outcome is binary, you should use logistic regression.
Q: What is the role of regularization in linear regression?
A: Regularization is a technique used to reduce the complexity of a linear regression model. It can help prevent overfitting and improve the model's performance on unseen data.
Q: How can I implement regularization in my linear regression model?
A: You can implement regularization in your linear regression model using techniques such as L1 or L2 regularization. You can also use cross-validation to evaluate the model's performance on unseen data.
Q: What is the difference between L1 and L2 regularization?
A: L1 regularization adds a penalty term to the loss function that is proportional to the absolute value of the coefficients. L2 regularization adds a penalty term that is proportional to the square of the coefficients. L1 regularization is also known as Lasso regression, while L2 regularization is also known as Ridge regression.